Here is a list of all files with brief descriptions:

bit.h	Bit manipulation helpers
console.c
console.h
console_socket.c
console_socket.h
ge.c
ge.h
log.c
log.h
main.c
mainpage.h
msl-commands.c
msl-comments.h
msl-states.c
msl-timings.c
msl-timings.h
msl.c
msl.h
opcodes.h
peripherical.c
peripherical.h
pulse.c
reader.c
reader.h
signals.h	Signals